Kidney
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Glo-In-One-v2: holistic identification of glomerular cells, tissues, and lesions in human and mouse histopathology
Yu, Lining; Yin, Mengmeng; Deng, Ruining; Liu, Quan; Yao, Tianyuan; Cui, Can; Guo, Junlin; Wang, Yu; Wang, Yaohong; Zhao, Shilin; Yang, Haichun; & Huo, Yuankai. (2025).聽Glo-In-One-v2: Holistic identification of glomerular cells, tissues, and lesions in human and mouse histopathology.聽Journal of Medical Imaging,聽12(6), 61406.聽https://doi.org/10.1117/1.JMI.12.6.061406 Segmenting… Read MoreJan. 28, 2026
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Evaluating cell AI foundation models in kidney pathology with human-in-the-loop enrichment
Guo, J., Lu, S., Cui, C., Deng, R., Yao, T., Tao, Z., Lin, Y., Lionts, M., Liu, Q., Xiong, J., Wang, Y., Zhao, S., Chang, C. E., Wilkes, M., Fogo, A. B., Yin, M., Yang, H., & Huo, Y. (2025).聽Evaluating cell AI foundation models in kidney pathology… Read MoreDec. 19, 2025
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SynStitch: A Self-Supervised Learning Network for Ultrasound Image Stitching Using Synthetic Training Pairs and Indirect Supervision
Yao, Xing; Yu, Runxuan; Hu, Dewei; Yang, Hao; Lou, Ange; Wang, Jiacheng; Lu, Daiwei; Arenas, Gabriel; Oguz, Baris; Pouch, Alison; Schwartz, Nadav; Byram, Brett C.; Oguz, Ipek. 鈥淪ynStitch: A self-supervised learning network for ultrasound image stitching using synthetic training pairs and indirect supervision.鈥� Proceedings – International… Read MoreJun. 20, 2025
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GloFinder: AI-empowered QuPath plugin for WSI-level glomerular detection, visualization, and curation
Yue, Jialin; Yao, Tianyuan; Deng, Ruining; Lu, Siqi; Guo, Junlin; Liu, Quan; Xiong, Juming; Yin, Mengmeng; Yang, Haichun; Huo, Yuankai. “GloFinder: AI-empowered QuPath plugin for WSI-level glomerular detection, visualization, and curation.” Journal of Pathology Informatics 17 (2025): 100433. https://doi.org/10.1016/j.jpi.2025.100433.聽… Read MoreApr. 23, 2025
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Spatial Pathomics Toolkit for Quantitative Analysis of Podocyte Nuclei with Histology and Spatial Transcriptomics Data in Renal Pathology
Jiayuan Chen, Yu Wang, Ruining Deng, Quan Liu, Can Cui, Tianyuan Yao, Yilin Liu, Jianyong Zhong, Agnes B. Fogo, Haichun Yang, Shilin Zhao, and Yuankai Huo. “Spatial Pathomics Toolkit for Quantitative Analysis of Podocyte Nuclei with Histology and Spatial Transcriptomics Data in Renal Pathology.” Proceedings of SPIE Medical Imaging… Read MoreJun. 20, 2024
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Evaluation Kidney Layer Segmentation on Whole Slide Imaging using Convolutional Neural Networks and Transformers
Muhao Liu, Chenyang Qi, Shunxing Bao, Quan Liu, Ruining Deng, Yu Wang, Shilin Zhao, Haichun Yang, and Yuankai Huo. “Evaluation Kidney Layer Segmentation on Whole Slide Imaging using Convolutional Neural Networks and Transformers.” Proceedings of SPIE Medical Imaging 2024: Digital and Computational Pathology, vol. 12933, 129330I, 2024. Segmenting different… Read MoreJun. 20, 2024