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Tang, Yucheng.; He, Yufan.; Nath, Vishwesh.; Guo, Pengfeig.; Deng, Ruining.; Yao, Tianyuan.; Liu, Quan.; Cui, Can.; Yang, Yuechen.; Yin, Mengmeng.; Xu, Ziyue.; Roth, Holger.; Xu, Daguang.; Yang, Haichun.; Huo, Yuankai. (2026). HoloHisto: End-to-end Gigapixel WSI Segmentation with 4K Resolution Sequential Tokenization. IS and T International Symposium on Electronic Imaging… Read More

Chongyu Qu; Ritchie Zhao; Ye Yu; Bin Liu; Tianyuan Yao; Junchao Zhu; Bennett A. Landman; Yucheng Tang; Yuankai Huo (2026). MedPTQ: A practical pipeline for real post-training quantization in 3D medical image segmentation. Journal of Medical Imaging, 13(1), 014006. https://doi.org/10.1117/1.JMI.13.1.014006 This study focuses on making advanced deep… Read More

Zhang, Jinwei; Zuo, Lianrui; Dewey, Blake E.; Remedios, Samuel W.; Liu, Yihao; Hays, Savannah P.; Pham, Dzung L.; Mowry, Ellen M.; Newsome, Scott Douglas; Calabresi, Peter Arthur; Saidha, Shiv; Carass, Aaron; & Prince, Jerry L. (2026). UNISELF: A unified network with instance normalization and self-ensembled lesion fusion for… Read More

Krishnan, Aravind R., Li, Thomas Z., Remedios, Lucas W., Kim, Michael E., Gao, Chenyu., Rudravaram, Gaurav., McMaster, Elyssa M., Saunders, Adam M., Bao, Shunxing., Xu, Kaiwen., Zuo, Lianrui., Sandler, Kim Lori., Maldonado, Fabien., Huo, Yuankai., & Landman, Bennett Allan. (2025). Multipath cycleGAN for harmonization of paired and unpaired… Read More

Guo, Junlin., Zimmer-Dauphinee, James R., Nieusma, Jordan M., Lu, Siqi., Liu, Quan., Deng, Ruining., Cui, Can., Yue, Jialin., Lin, Yizhe., Yao, Tianyuan., Xiong, Juming., Zhu, Junchao., Qu, Chongyu., Yang, Yuechen., Wilkes, Mitchell., Wang, Xiao., VanValkenburgh, Parker., Wernke, Steven A., & Huo, Yuankai. (2025). DeepAndes: A Self-Supervised Vision Foundation… Read More

Bayrak, Roza G.; Hansen, Colin B.; Salas, Jorge Alberto; Ahmed, Nafis; Lyu, Ilwoo; Mather, Mara M.; Huo, Yuankai; Chang, Catie E. (2025). DeepPhysioRecon: Tracing peripheral physiology in low frequency fMRI dynamics. Imaging Neuroscience, 3, IMAG.a.163. https://doi.org/10.1162/IMAG.a.163 Many brain studies that use functional magnetic resonance… Read More

Xiong, Juming, Deng, Ruining, Yue, Jialin, Lu, Siqi, Guo, Junlin, Lionts, Marilyn, Yao, Tianyuan, Cui, Can, Zhu, Junchao, & Qu, Chongyu. (2025). ZeroReg3D: A zero-shot registration pipeline for 3D consecutive histopathology image reconstruction. Journal of Medical Imaging, 12(4), 44002. https://doi.org/10.1117/1.JMI.12.4.044002 Histological analysis, which examines… Read More

Lu, Zhengyi, Liang, Hao, Lu, Ming, Wang, Xiao, Yan, Xinqiang, & Huo, Yuankai. (2025). “Fast-RF-Shimming: Accelerate RF shimming in 7T MRI using deep learning.” Meta-Radiology, 3(3), 100166. https://doi.org/10.1016/j.metrad.2025.100166 Ultrahigh field (UHF) Magnetic Resonance Imaging (MRI) provides much stronger signals than standard MRI, allowing for… Read More

Cai, Leon Y., Lee, Ho Hin, Johnson, Graham W., Newlin, Nancy R., Ramadass, Karthik, Kim, Michael E., Archer, Derek B., Hohman, Timothy J., Jefferson, Angela L., Begnoche, J. Patrick, Boyd, Brian D., Taylor, Warren D., Morgan, Victoria L., Englot, Dario J., Nath, Vishwesh, Chotai, Silky, Barquero, Laura, D’Archangel,… Read More

Azher, Zarif L.; Srinivasan, Gokul; Yao, Keluo; Le, Minh-Khang; Lau, Ken S.; Kaur, Harsimran; Kolling, Fred; Vaickus, Louis; Lu, Xiaoying; Levy, Joshua J. “Mapping Three-Dimensional Tumor Heterogeneity through Deep Learning Inference of Spatial… Read More